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Kirkwood

Login:
kirkwood.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 6.5 (Santiago)

 System Component Specifications
 CPU 2x Intel(R) Xeon(R) CPU E5-2687W @ 3.10GHz.  Total: 16 cores / 16 hyperthreads
 GPU 1x GeForce GT 520 (Display Only)
 Memory 126 GB 
 Disk 37 TB blah-blah RAID.  Path /data


 SoftwareVersion
Install Path Notes 
 AMBERAmber12 /usr/local/programs/amber12/Passed Tests? 
 Gaussiang09 Revision??? /usr/local/programs/g09/  Environment?
 VMDv. 1.9.1 /usr/local/programs/vmd/ 

Other Notes:

Onsager

Login:
onsager.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 6.5 (Santiago)

 System Component Specifications
 CPU 2x Intel(R) Xeon(R) CPU E5-2687W @ 3.10GHz.  Total: 16 cores / 16 hyperthreads
 GPU 1x GeForce GT 520 (Display Only)
 Memory 126 GB 
 Disk 37 TB blah-blah RAID.  Path /data


 SoftwareVersion
Install Path Notes 
 AMBERAmber12 /usr/local/programs/amber12/Passed Tests? 
 Gaussiang09 Revision ??? /usr/local/programs/g09/How to load environment? 
 VMDv. 1.9.1 /usr/local/programs/vmd/ 

Other Notes:

Shannon

Login:
shannon.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 6.5 (Santiago)

 System Component Specifications
 CPU1x Intel(R) Core(TM) i7-3960X CPU @ 3.30GHz.  (Total: 6 cores / 6 hyperthreads)
 GPU2x GeForce GTX 780
 Memory62.9 GB
 Disk11 TB.  Path /home


 SoftwareVersion
Install Path Notes 
 AMBERAmber14 /usr/local/amber14gnu/Passed Tests? 
 Cuda    v. 5.0/usr/local/cuda-5.0/ 
 Gaussianv. ?? /usr/local/g09Directory unreadable?
 Schrodinger??/usr/local/schrodinger/ 

Other Notes:
- AMBER GPU Validation test: /home/nhenriksen/GPU-test/amber14gnu
GPU ID 0PASS   (Previously FAIL with "cudaMemcpy GpuBuffer::Download failed unknown error" ... not sure why)
GPU ID 1: PASS
    
   

Kollman

Login:
kollman.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 6.5 (Santiago)

 System Component Specifications
 CPU 2x Intel(R) Xeon(R) CPU E5-2620 0 @ 2.00GHz.  (Total: 12 cores / 12 hyperthreads)
 GPU 4x GeForce GTX 690 (Total: 8 GPUs )
 Memory 30.7 GB 
 Disk 90 GB blah-blah? .  Path /home


 SoftwareVersion
Install Path Notes 
 AMBERAmber14 /usr/local/amber14gnu/Passed Tests? 
 Cuda    v. 5.0/usr/local/cuda-5.0/ 

Other Notes:
AMBER GPU Validation test: /home/nhenriksen/GPU-test/amber14gnu
GPU ID 0: PASS 
GPU ID 1: PASS
GPU ID 2: PASS
GPU ID 3: PASS
GPU ID 4: PASS
GPU ID 5: PASS
GPU ID 6: PASS
GPU ID 7: PASS

Gilson-Alien

Login:
gilson-alien.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 6.5 (Santiago)

 System Component Specifications
 CPU 1x Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz.  (Total: 4 cores / 4 hyperthreads)
 GPU 1x GeForce GT 520 (Display Only)
 GPU 1x GeForce GTX 690 (Total: 2 GPUs )
 Memory 7.67 GB 
 Disk 844 GB blah-blah? .  Path /home


 SoftwareVersion
Install Path Notes 
 AMBERAmber14 /usr/local/amber14gnu/Passed Tests? 
 Cuda    v. 5.0/usr/local/cuda-5.0/ 
 Gaussianv. ?? /usr/local/g09Directory unreadable?
 Schrodinger??/usr/local/schrodinger/ 

Other Notes:
- AMBER GPU Validation test: /home/nhenriksen/GPU-test/amber14gnu
GPU ID 0: PASS 
GPU ID 1: PASS


Enthalpy

Login:
enthalpy.ucsd.edu

OS:
Red Hat Enterprise Linux Server release 5.10 (Tikanga)

 System Component Specifications
 CPU 1x Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz.  (Total: 4 cores / 4 hyperthreads)
 GPU 2x GeForce GTX 580
 Memory 15.7 GB 
 Disk 3.3 TB blah-blah? .  Path /Work


 SoftwareVersion
Install Path Notes 
 AMBERAmber14 /usr/local/amber14gnu/Passed Tests? 
 Cuda    v. 5.0/usr/local/cuda-5.0/ 
 Gaussianv. ?? /usr/local/g09Directory unreadable?
 Schrodinger??/usr/local/schrodinger/ 

Other Notes:
- AMBER GPU Validation test: /work/nhenriksen/GPU-test/
GPU ID 0: FAIL  19/20  (Test performed 2 twice)
GPU ID 1: PASS

UCSD Resources

TSCC

Login:
tscc.sdsc.edu

OS:
CentOS release 6.3 (Final)

 Nodes Specifications
 CPU (Gilson) 10x General Purpose Nodes (Each with 16 2.6GHz Intel Xeon E5-2670 cores, 128 GB RAM)
 GPU (Gilson) 2x Old GPU Nodes (Each with 4 GTX 680's and 12 2.3GHz Intel Xeon E5-2630 cores, 64 GB RAM)
 GPU (Gilson) 2x New GPU Nodes (Each with 4 GTX 780 and 12 2.6GHz Intel Xeon E5-2630 cores, 32 GB RAM)
  
 CPU (Condo) 107x General Purpose Nodes (Each with 16 Intel cores,  >=64 GB RAM)
 GPU (McCammon) 16x GPU Nodes (Each with 4 GTX 780's and 12 2.3GHz Intel Xeon E5-2630 cores, 32 GB RAM)
  
 CPU (Hotel) 14x General Purpose Nodes (16 Intel Cores)
 GPU (Hotel) 3x GPU Nodes (Each with 4 GTX 680's)


 SoftwareVersion
Install Path Notes 
 AMBERAmber14 Talk to NielPassed Tests? 
 Cuda    v. 5.5Module File 
 Gaussianv.09.D.01Module File





Other Notes:
- All Gilson GPUs pass tests:
tscc-gpu-3-1:  100/100
tscc-gpu-3-2:  100/100
tscc-gpu-3-3:  100/100
tscc-gpu-3-4:  100/100
- Some McCammon nodes failed in the past.  I'm not sure of the current status.
tscc-gpu-6-3.0:  11/20
tscc-gpu-6-3.1:  17/20
tscc-gpu-6-6.3:  18/20




CTBP


CTBP-GPU


Rocce




External Resources

XSEDE


Anton